28S-D2
Stems - interleave 3, 28S-D2
HelixBasebase pair composition %
 pair# seqscomplementarynon-complementary
   gccguaauguugaaacagcacccugaggucuu--
3g152897.7  0.2  0.2  0.8 0.2  0.4  0.2     0.2 
 252899.4                0.2 
 3528 2.5 96.8   0.4           0.2 
 4528   98.1   0.2 0.9 0.2       0.2 0.2 
 5528 1.9 23.0 5.1  14.8 31.9 0.4 8.5 0.6 0.2 2.3   0.6 10.2 0.2 
3h152895.6 0.4 0.8 0.2 2.7        0.2    0.2 
 25284.9   43.6 51.0   0.2         0.2 
 352899.1    0.4            0.2 
 4528 69.4 0.2   30.0           0.2 
 5528 99.2         0.2      0.2 
3i152899.8                0.2 
 2528 99.8               0.2 
 35281.3   98.5             0.2 
 45280.2 32.4 11.6  0.4 49.7 0.6  0.6 1.7   0.2 0.8 0.4 0.9 0.6 
3j152899.6                0.2 
 2528 0.9 98.1             0.4 0.2 
 3528 49.7 10.1 2.7  37.4           0.2 
 45280.2 54.8  36.4 1.1 5.3   0.6  0.2   0.2  0.9 0.2 
3k-1152896.4    2.7        0.8    0.2 
 25280.6   0.9 97.2  0.6      0.6    0.2 
 3528 98.1 0.9 0.4      0.2       0.2 
 4528 5.9 90.1 0.6 0.2 2.3 0.2      0.2   0.4 0.2 
 5528 98.7 0.6  0.2      0.2      0.2 
 652880.3 3.2 1.5 0.2 11.2 0.2  1.1     0.2  1.9  0.2 
 75280.9 1.5 76.3 1.3 2.1 13.1    1.5      3.0 0.2 
   gccguaauguugaaacagcacccugaggucuu--
3k-215280.2 56.0 30.0 8.3  3.8 0.2 0.2  0.4 0.2 0.2    0.4 0.2 
 252893.9 0.4  0.4 4.7      0.2    0.2  0.2 
 352816.7  0.2 8.2 72.3 0.9 0.2      0.2   0.9 0.2 
 4528 97.9 0.8  0.2 0.2    0.6  0.2     0.2 
3l152851.0  0.4 0.6 47.2   0.2    0.2 0.2    0.2 
 252892.4   2.5 4.7 0.2           0.2 
 3528 88.0 1.5 0.4  8.0    0.6 0.4   0.2 0.4  0.2 
 45281.1 3.0 2.7 2.8 0.8 75.1 0.2 0.8 9.1 1.5    0.6  2.1 0.2 
 55285.7 73.8 1.1 1.3 5.1 2.1 0.8 1.7 1.9 0.6  0.4 4.4 0.6 0.2 0.2 0.2