28S-D2+core+D3
Stems - interleave 5, 28S-D2+core+D3
HelixBasebase pair composition %
 pair# seqscomplementarynon-complementary
   gccguaauguugaaacagcacccugaggucuu--
H5631524 91.2         1.5      0.2 
 2524 92.7               0.2 
 352491.8          1.0      0.2 
 4524  92.5          0.2    0.2 
H5891517 99.4                
 2517     99.4            
 3517   99.4              
 451731.6   65.5 2.3             
 5517 99.4                
 6517   0.2    99.2          
 7517 1.0 98.4               
 851799.4                 
 9517 1.7 96.9   0.2    0.6        
 105171.9   11.0 86.4             
 11517 99.4                
 1251798.4       1.0          
 13517 99.4                
H604151799.4                0.6 
 2517     99.4           0.6 
 3517 99.4               0.6 
 4517   1.2   98.1  0.2        0.6 
 5517  63.8   33.5  0.2   0.8    1.2  0.6 
 6517  99.2   0.2           0.6 
 751731.2    68.2            0.6 
 851795.2   3.3 1.0            0.6 
 951799.4                0.6 
   gccguaauguugaaacagcacccugaggucuu--
H6281517   99.4             0.6 
 2517 0.2    99.2           0.6 
D3-1a152892.4   0.2 0.8   3.8         2.7 
 252857.1   38.1 1.5   0.2     0.2    2.5 
 3528 1.5 90.7   4.2 0.2         0.6 2.5 
D3-1b15280.2 91.7 1.1 0.2 0.6 2.1   0.2 0.8  0.2  0.2   2.7 
D3-1c152823.7 22.8 1.5 5.1 38.1 0.4     0.4 0.2 1.9  1.1 1.7 2.7 
 252868.7 0.4 0.2 10.4 6.3  0.2 0.4    0.2  0.2  10.2 2.7 
 35280.6 91.3 1.7  0.4 2.3      0.2  0.8   2.7