Matrix data - interleave 3, 28S-D2

28S-D2_helix-3-1

DERV052 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [------UGUC] GCC [----C] GACCGG CUGCC CGGCGG

DERV037 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGU [GCGCCGC-] CUGUCCCG [GA-----] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACG] CCCG-----G [------ACUC] GCC [----C] GACCGG CUGCC CGGCGG

DERV051 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UUGGG [CUGUCGA-] CUGUCACG [GA-----] CGU--- [UUCG--] ---GCG [---UCG] CGUG-GCAG [--ACA] CCCA-----G [--------UC] GCC [----C] GACCGG CUGCC CGGCGG

DERV012 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUUCCG [GA-----] CGU--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV059 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGAG [CUGUCGC-] CUGUCACG [GA-----] CGU--- [UUCG--] ---GCG [---UCG] CGUG-GCAG [--ACA] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV038 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUUCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [------UGUA] UCC [----U] GGCCGG CUGCU CGACGG

DERV039 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [UAGUUGC-] CUGUCCCG [C------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACC] CUCG-----G [UGCGCAUACA] ACC [----C] GACCGG CUGCC CGGCGG

DERV050 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGU [GCGCCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACG] CCCG-----G [--------AU] GCC [----C] GAUCGG CUGCU CGGCGG

DERV026 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CUGGG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUG] CGGG-GCAG [--ACA] CCCG-----G [--------UA] GCC [----C] GGCCGG CUGCC CGGCGG

DERV006 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CUGGG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUG] CGGG-GCAG [--ACA] CCCU-----G [--------UA] GCC [----C] GGCCGG CUGCC CGGCGG

DERV008 CUAGUAGGA CGUCGC GAC CCGCUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUUCCG [GU-----] CGC--- [UUCG--] ---GCG [---UCG] CGGA-GCAG [--ACA] CCCG-----G [------UGUU] GCC [----C] GACCGG CUGCC CGGCGG

DERV007 CUAGUAGGA CGUCGC GAC CCGCUG GGUG UCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUUCCG [GU-----] CGCU-- [UCGC--] --GGCG [---UCG] CGGA-GCAG [--ACG] CCCG-----G [------UGUA] GCC [----C] GACCGG CUGCC CGGCGG

DERV030 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGU [GCGCCGC-] CUGUCCCG [UCG----] CGCU-- [UCAC--] --GGCG [---UCG] CGGG-GCAG [--ACG] CCCG-----G [--------UC] GCC [----C] GACCGG CUGCU CGGCGG

DERV066 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CUGGG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUG] CGGG-GCAG [--ACA] CCCG-----G [--------UA] GCC [----C] GGCCGG CUGCC CGGCGG

DERV061 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUG] CGGG-GCAG [--ACA] CCCG-----G [--------UA] ACC [----C] GGCCGG CUGCC CGGCGG

DERV060 CUAGUAGGA CGUCGC GAC CCGUCG AGAU ACGGCC UAA GGC - ACGGG [CGUGAGC-] CUGUCACG [A------] UGCGU- [UUCG--] ---GCG [----UA] CGUG-GCAG [--AAC] CUCG-----U [--------UG] UCC [----C] GACCGG CUGCU CGGCGG

DERV048 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [------UGUA] GCC [----C] GGCCGG CUGCC CGGCGG

DERV043 CUGGUAGGA CGUCGC GAC CCGUUG AGCG UCGGUC UAC GGC A CGGGG [UGGGAGU-] CCGUCGGC [GUUGGGG] CGCCCU [CUCG--] GGGGUG [UCGCGC] GUCGCGCGG [-ACCA] CCCCUCACGG [---------U] GCC [----C] GGUCGG CUGCU CGACGG

DERV055 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UCG---] ---GCG [---UCU] CGGG-GCAG [--ACG] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV034 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [U------] CGCU-- [UCG---] ---GCG [---UAG] CGGG-UCAG [--ACA] CCCG-----G [--------UC] GCC [----C] GGCCGG CUGCU CGGCGG

DERV001 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] UGGG-GCAG [--ACG] UCCG-----G [---UGCACCU] ACC [----C] GACCGG CUGCU CGGCGG

DERV049 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] CGGG-GCAG [--ACG] UCCG-----G [----UGCACU] ACC [----C] GACCGG CUGCU CGGCGG

DERV056 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] CGGG-GCAG [--ACG] UCCG-----G [--UGUUACCU] AGC [----C] GACCGG CUGCU CGGCGG

DERV047 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] CGGG-GCAG [--ACG] UCCG-----G [---UGCACCU] ACC [----C] GACCGG CUGCU CGGCGG

DERV033 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] UGGG-GCAG [--ACG] UCCG-----G [---UGCACCU] ACC [----C] GACCGG CUGCU CGGCGG

DERV025 CUAGUAGAA CGUCGC GAC CCGCUG GGCG CCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUCCCG [C------] CGUC-- [CUUUGU] --GGCG [---UCG] CGGG-CCAG [--ACG] CCCG-----G [---UGCAUCG] UCC [----C] GACCGG CUGCC CGGCGG

DERV045 CUAGUAGAA CGUCGC GAC CCGCUG AGCG CCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUCCCG [C------] CGUC-- [CCUGGU] --GGCG [---UCG] CGGG-GCAG [--ACG] CCCG-----G [---UGCACCG] UCC [----C] GACCGG CUGCC CGGCGG

DERV029 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [UCGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] CGGG-GCAG [--ACA] UCCG-----G [---UGCACCU] ACC [----C] GACCGG CUGCU CGGCGG

DERV058 CUAGUAGAA CGUCGC GAC CCGCUG GGCG CCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUCCCG [C------] CGUC-- [CUUUGU] --GGCG [---UCG] CGGG-CCAG [--ACG] CCCG-----G [---UGCAUCG] UCC [----C] GACCGG CUGCC CGGCGG

DERV020 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGU - CCGGG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UCCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [--------UA] GCC [----C] GGCCGG CUGCU CGGCGG

DERV002 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGU A CCGGG [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [--------UA] GCC [----U] GGCCGG CUGCU CGGCGG

DERV010 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCCG-----G [------UGUU] GCC [----C] GGCCGG CUGCC CGGCGG

DERV027 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACA] CCCG-----G [--------UU] GCC [----C] GGCCGG CUGCU CGGCGG

DERV057 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUU] CGGG-GCAG [--ACG] CUCG-----A [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV065 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UAU] CGGG-GCAG [--ACA] CUCG-----G [--------UU] GCC [----C] GGCCGG CUGCC CGGCGG

DERV005 CUAGUAGAA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACG] CUCG-----G [-----UGUCA] UCC [----C] GACCGG CUGCC CGGCGG

DERV063 CUAGUAGAA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACG] CUCG-----G [--UGUUGUCA] UCC [----C] GACCGG CUGCC CGGCGG

DERV004 CUAGUAGAA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACG] CUCG-----G [-----UGUCA] UCC [----C] GACCGG CUGCC CGGCGG

DERV028 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCU] CGGG-GCAG [--ACA] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV035 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UUGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCU] CGGG-GCAG [--ACG] CUCG-----G [--------UC] GCC [----C] GACCGG CUGCC CGGCGG

DERV031 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCU] CGGG-ACAG [--ACG] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV046 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGU - CCGGG [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-GCAG [--ACA] CCUG-----G [--------UA] GCC [----U] GGCCGG CUGCU CGGCGG

DERV015 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCU] CGGG-GCAG [--ACA] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DERV036 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACA] CCCG-----G [--------UA] GCC [----C] GGCCGG CUGCU CGGCGG

DERV062 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [C------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACA] CCCG-----G [--------UA] ACC [----C] GGCCGG CUGCU CGGCGG

DERV044 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGU - CCGGG [UUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCG] CGGG-UCAG [--ACA] CCCG-----G [--------UA] GCC [----C] GGCCGG CUGCU CGGCGG

DERV016 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UUGGG [CUGUCGA-] CUGUCUCG [GA-----] CGC--- [UUCG--] ---GCG [---UCG] CGUG-GCAG [--ACA] CCCA-----G [--------UU] GCC [----C] GACCGG CUGCC CGGCGG

DERV041 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UAGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UUU] CGGG-GUAG [--ACG] CUCG-----A [--------UC] GCC [----C] GACCGG CUGCC CGGCGG

DERV009 CUAGUAGGA CGUCGC GAC CCGCUG GGUG UCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUUCCG [GU-----] CGCU-- [UCGC--] --GGCG [---UCG] CGGA-GCAG [--ACG] CCCG-----G [------UGUA] GCC [----C] GACCGG CUGCC CGGCGG

DERV019 CUAGUAGAA CGUCGC GAC CCGCUG AGCG CCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUCCCG [C------] CGUC-- [CCUGGU] --GGCG [---UCG] CGGG-GCAG [--ACG] CCCG-----G [-------UGC] ACC [AUCCC] GACCGG CUGCC CGGCGG

DERV054 CUAGUAGGA CGUCGC GAC CCGCUG GGUG UCGGUC UAC GGC - CCGGU [GCGUCGC-] CUGUUCCG [GU-----] CGCU-- [UCGC--] --GGCG [---ACG] CGGA-GCAG [--ACG] CCCG-----G [------UGUA] GCC [----C] GACCGG CUGCC CGGCGG

DERV068 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [UAGUCGC-] CUGUCCCG [C------] CGC--- [UUCG--] ---GCG [---UCG] CGUG-GCAG [--ACU] CCCG-----G [--------CA] GCC [----C] GGCCGG CUGCC CGGCGG

DERV021 CCAGUAGGA CGUCGC GAC CCGUCC AUCG CCGGUC UAC GGC - GCGGG [CGCG----] UAGUCCC- [-------] ------ [GGGC--] ------ [------] -GGC-GC-G [CGCGU] CCCG----GC [--------CC] GCC [----C] GGCCGG CCGUU GGACGG

DERV040 --------- ------ --- ------ ---- ------ --- --- - ----- [--------] -------- [-------] ------ [------] ------ [------] --------- [-----] ---------- [----------] --- [-----] ------ ----- ------

DERV064 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - UCGAG [UCGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCU] CGGG-GCAG [--ACG] CUCG-----G [--------UC] GCC [----C] GGCCGG CUGCC CGGCGG

DWTN002 CCAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGA [ACGUCGC-] CUGUCCCG [C------] CGCC-- [UCGC--] --GGCG [---UCG] CGGG-GCAG [--ACG] UCCG-----G [---UGCACCU] ACC [----C] GACCGG CUGCU CGGCGG

DWTN242 --------- ------ --- ------ ---- ------ --- --- - ----- [--------] -------- [-------] ------ [------] ------ [------] --------- [-----] ---------- [----------] --- [-----] ------ ----- ------

DWTN253 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAC GGC - CCGGG [CUGUCGC-] CUGUCCCG [U------] CGC--- [UUCG--] ---GCG [---UCA] CGGG-GCAG [--ACA] CCCG-----G [--------UA] GCU [----C] GGCCGG CUGCU CGGCGG

GAST248 CUAGUAGGA CGUCGC GAC CCGUCG AGUG UCGGCC UAC GGC - ACGGG [AGCGAGC-] CUGUCACG [U------] UGCGC- [CUCG--] -GCGCA [------] CGGG-GCAG [--AAC] CCCG-----U [---------U] GUC [---CC] GACCGG CUGCU CGGCGG

PSEUD21 CUAGUAGGA CGUCGC GAC CCGUUG GGUG UCGGUC UAA GGC - AUGGG [CGUGAGC-] CUGUCGCG [U------] UGCGU- [CACCAC] -GCGCA [------] CGCG-GUAG [--AAC] CCCG-----U [---------U] GUC [--CCC] GACCGG CUGCC CGGCGG

[ 3 3 3 3 3 3 3 3 4 4 [ 4] 4 [ 4] 4 [ 4] 4 [ 4] 4 [ 5] 5 [ 5] 5 [ 5] 5 5 5 ]

[ 2 3 4 5 6 7 8 9 0 1 [ 2] 3 [ 4] 5 [ 6] 7 [ 8] 9 [ 0] 1 [ 2] 3 [ 4] 5 6 7 ]

[ 111111111 111111 111 111111 1111 111111 111 111 1 11111 [--------] 11111111 [-------] 111111 [------] 111111 [------] 111111111 [-----] 1111111111 [----------] 111 [-----] 111111 11111 111111 ]

[ 333333333 333333 333 333333 3333 333333 333 333 3 33333 [--------] 33333333 [-------] 333333 [------] 333333 [------] 444444444 [-----] 4444444444 [----------] 444 [-----] 444444 44444 444444 ]

[ 333333444 444444 455 555555 5566 666666 667 777 7 77777 [--------] 88888888 [-------] 889999 [------] 999999 [------] 000000000 [-----] 0111111111 [----------] 122 [-----] 222222 22333 333333 ]

[ 456789012 345678 901 234567 8901 234567 890 123 4 56789 [--------] 01234567 [-------] 890123 [------] 456789 [------] 012345678 [-----] 9012345678 [----------] 901 [-----] 234567 89012 345678 ]