Column composition - interleave 3, 28S-D2

28S-D2_helix-3-1

1334CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCCC-

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 32 - ?

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU-

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-

1340 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

AAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1342AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-

1343CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU- - 33 - 3

CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1348CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1349GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 34 - ?

1350 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-

1351CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1352CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 35 - 3a

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCCC-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCC-

1357GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC-

1358AAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 36 - 3b

1360 AUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCC-

1361UGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1362AUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCC-

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 37 - 3c

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUC-

1367CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1368UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU- - 38 - ?

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-

1370 1370ACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1371GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 39 - 3d

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1373UUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1374A--------------------------------------- - 40 - ?

1375AAUUUUUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

UUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC- - 41 - 3e

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

AAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1379AAAAAUUUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

- 42 - ?

1380UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

AUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU- - 43 - 3f-1

UUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

AAUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1387GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC--

- 44 - ?

1388UUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--

1390 UUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-- - 45 - 3f-2

UUUGGCCCCCCCC---------------------------

UC--------------------------------------

1393U---------------------------------------

- 46 - ?

1394G---------------------------------------

GG--------------------------------------

GGGGGGGGGGC----------------------------- - 47 - 3f-2'

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--

1399AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--

- 48 - ?

1400UGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--

UGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC-

AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC- - 49 - 3f-1'

C---------------------------------------

AUUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC-

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG--

1408GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

- 50 - ?

1409UUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1410 UUUUUUUUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

AUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC-

U--------------------------------------- - 51 - 3e'

C---------------------------------------

A---------------------------------------

C---------------------------------------

G---------------------------------------

1418AUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC-

- 52 - ?

1419AAAAAAAUUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 53 - 3d'

1420 UGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1421UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

- 54 - ?

1422GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

AAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGG-

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC- - 55 - 3c'

CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1427GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1428CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUC- - 56 - 3b'

1430 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

1432UUUUUUUUUUUUUUUCCCCCCCCCCCCCCCCCCCCCCCC-

1433GCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 57 - 3a'

CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-

GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-

1438GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-