Stems - interleave 0,
HelixBasebase pair composition %
 pair# seqscomplementarynon-complementary
   gccguaauguugaaacagcacccugaggucuu--
H9110994.4                5.6 
 2109   94.4             5.6 
 310994.4                5.6 
 4109     94.4           5.6 
 5109  0.9   93.5           5.6 
H171109  92.6               
 2109 90.7 1.9               
 3109 18.5  73.1        0.9      
H27110990.7                1.9 
 2109   89.8 0.9            1.9 
 31093.7  82.4 3.7            0.9 1.9 
 4109 2.8 88.0              1.9 
 5109   90.7             1.9 
 6109   90.7             1.9 
 7109 90.7               1.9 
 810990.7                1.9 
 9109 90.7               1.9 
 10109  90.7              1.9 
H39110989.8   1.9 0.9            4.6 
 2109 90.7 1.9              4.6 
 310991.7   0.9             4.6 
 410992.6                4.6 
 5109 84.3 8.3              4.6 
 61090.9   91.7             4.6 
 710969.4  11.1 8.3 0.9 1.9         0.9  4.6 
 810992.6                4.6 
   gccguaauguugaaacagcacccugaggucuu--
H471109 92.6               3.7 
 2109 92.6               3.7 
 3109   92.6             3.7 
 4109 92.6               3.7 
 5109  92.6              3.7 
 610992.6                3.7 
 7109 92.6               3.7 
H61110994.4                5.6 
 2109     94.4           5.6 
 3109 92.6 0.9   0.9           5.6 
 410963.0   31.5             5.6 
 5109 94.4               5.6 
 6109            94.4    5.6 
H113110993.5                3.7 
 2109  93.5              3.7 
 310993.5                3.7 
H1221109   11.1 75.0   7.4         4.6 
 2109 75.0 18.5              4.6 
 310922.2 39.8 23.1 8.3             4.6 
 4109  75.9   17.6           4.6 
 510947.2 5.6  39.8 0.9            4.6 
 610990.7   2.8             4.6 
 710991.7   1.9             4.6 
 8109  0.9   1.9   71.3    17.6 1.9   4.6 
 9109 7.4 75.0 12.0             4.6 
 101092.8 73.1 6.5 8.3  3.7           4.6 
 11109 88.9 4.6         0.9     4.6 
 121090.9 33.3 50.9  0.9 7.4          0.9 4.6 
 1310919.4 0.9 25.9 36.1 0.9 3.7          7.4 4.6 
 141099.3 0.9 16.7 30.6 33.3   0.9        2.8 4.6 
 151094.6 2.8 63.9 14.8 1.9 4.6       0.9 0.9   4.6 
 1610926.9 16.7 1.9 40.7  8.3           4.6 
 1710990.7 0.9  1.9    0.9         4.6 
   gccguaauguugaaacagcacccugaggucuu--
H144110989.8  1.9 2.8  0.9           4.6 
 2109 2.8  0.9  0.9        90.7   4.6 
 310993.5   1.9             4.6 
 410994.4        0.9        4.6 
 5109    11.1   81.5    1.9  0.9   4.6 
 6109 81.5 1.9  0.9     11.1       4.6 
 710915.7 25.0 25.0 25.0 0.9 3.7           4.6 
 810919.4 18.5 18.5 33.3  4.6    0.9       4.6 
 910923.1 25.0 35.2 10.2  1.9           4.6 
 101097.4 3.7 1.9 3.7 24.1 54.6           4.6 
 1110978.7 8.3 0.9 7.4             4.6 
H184110931.5 34.3 13.0 13.0  1.9 0.9          4.6 
 2109 47.2 46.3        0.9      4.6 
 31090.9 88.0 5.6              4.6 
 4109     0.9           98.1 
 5109     0.9           99.1 
 61090.9                99.1 
 7109     0.9           99.1 
 8109  0.9              99.1 
 9109 0.9               99.1