Stems - interleave 5, 28S-D2

28S-D2

3j-3j'3k-3k' 3l-3l'3m-3m' 3n-3n'3o-3o'3p-3p'

DERV052GUCA G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC CG-

2222 20120022220202222 22120222222021222 020

DERV037GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGCAGGCG-G-CUCG CCGG-UCGGGC-CUGCC CG-

2220 20120022220202222 22120222222022222 020

DERV051GUCU G-GC--CCGC-C-GAGC GGUC-AGACCG-GGCGG AC-

CAGU C-UGU-GGCA-G-CUUG CCAG-UCGGGC-CUGCC CG-

2220 20120022200202212 22220220222021222 020

DERV012GUCU G-GC--CCGU-U-GAGC GGAC-AGACCG-GGCGG AC-

CAGU C-UGU-GGCA-G-CUUG CCUG-UCGGGC-CUGCC CG-

2220 20120022220102212 22220220222021222 020

DERV059GUCU G-GC--CCGU-C-GAGC GGCC-AGACCG-GGCGG AC-

CAGU U-UGU-GGCA-G-CUUG CCGG-UCGGGC-CUGCC CG-

2220 10120022220202212 22220220222021222 020

DERV038GUCA G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU CUUGU-GGCG-G-CUCG CCGG-UCAGGC-CUGCC CG-

2222 20120022220202222 22120220222022222 020

DERV039GUCC G-GC--UCGC-C-GAGC GAUC-AGCUCG-GACGG AC-

CAGG C-UGUAGUCG-G-UUCG CUAG-UCGAGC-CUGCC UG-

2222 20120010220201222 22220222222022222 220

DERV050GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGUAGGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22120222222022222 220

DERV026GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22120222222022222 220

DERV006GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-GUCUCG CCAG-UCGGGC-CUGCC CG-

2220 20120022220202222 22220222222022222 020

DERV008GUCA G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGA-GGCG-G-AUCG CCGG-UCGGGC-CUGCC CG-

2222 20120022220200222 22120222222021222 020

DERV007GUCA G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-AUCG UCGG-UCGGGC-CUGCC UG-

2222 20120022220200222 12120222222021222 220

DERV030GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGCAGGCG-G-CUCG CCGG-UCGGGC-CUGCC CG-

2220 20120022220202222 22120222222022222 020

DERV066GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22120222222022222 220

DERV061GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-G-CUUG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202212 22120222222022222 220

3j-3j'3k-3k' 3l-3l'3m-3m' 3n-3n'3o-3o'3p-3p'

DERV060GUCC G--C--CCGU-C-GAGC GGUC-AGCCUG-GACGG AC-

CAGG C-UGU-GGCA-G-CUCG CCGG-UCGGAC-CUGCC UG-

2222 20020022220202222 22120222222022222 220

DERV048GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-CUCG UCGG-UCGGGC-CUGCC CG-

2220 20120022220202222 12120222222021222 020

DERV043GUCC G--C--CCGU-C-GAGC UGCCCGGGUCGGCACGG AC-

CAGG C-UGU-GGCA-GCUUCG GCGG-CAGGUC-GUGCC CG-

2222 20020022220201222 12220200102022222 020

DERV055GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DERV034GUCU G-GC--CCAC-C-GAGC GGUC-AGCCUG-GACGG AC-

CAGU C-UGU-GGUG-G-CUCG CCGG-UCUGGC-CUGCC AG-

2220 20120022220202222 22120220212022222 020

DERV001GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC UGU

2222 20120022220202222 22220222222020222 221

DERV049GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCUG-UCGGGC-CUGCC UGU

2222 20120022220202222 22020222222020222 221

DERV056GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC CGU

2222 20120022220202222 22220222222020222 021

DERV047GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC UGU

2222 20120022220202222 22220222222020222 221

DERV033GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC UGU

2222 20120022220202222 22220222222020222 221

DERV025GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-UACGG ACG

CAAG C-UGU-AGCGCG-UUCG CCAG-UAGGGC-CUGCC CAU

2202 20120022220201222 22220202222002222 001

DERV045GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-UACGG ACG

CAGG C-UGU-AGCGCG-CUCG CCAG-UCGGGC-CUGCC CAU

2222 20120022220202222 22220222222002222 001

DERV029GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC UGU

2222 20120022220202222 22220222222020222 221

DERV058GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-UACGG ACG

CAGG C-UGU-AGCGCG-UUCG CCAG-UCGGGC-CUGCC CAU

2222 20120022220201222 22220222222002222 001

DERV020GUCU G-GC--CCGU-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCA-G-UUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220201222 22120222222022222 220

3j-3j'3k-3k' 3l-3l'3m-3m' 3n-3n'3o-3o'3p-3p'

DERV002GUCU G-GC--CCGU-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-GGU-GGCA-G-UUCG CCGG-UCGGGC-CUGCC UG-

2220 20020022220201222 22120222222022222 220

DERV010GUCG G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC CG-

2221 20120022220202222 22120222222021222 020

DERV027GUCU G-GC--CCGC-C-GAGC GGUCCAGCCUG-GACGG AC-

CAGU C-UGU-GGUG-G-CUCG CCGG-UCUGGC-CUGCC UG-

2220 20120022120202222 22120220212022222 220

DERV057GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC CG-

2220 20120022220202222 22120222222022222 020

DERV065GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DERV005GUCC G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGC C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22120222222022222 220

DERV063GUCC G-GC--CCGC-C-GAGC GGCC-AGCCCG-GACGG AC-

CAGC C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22220222222022222 220

DERV004GUCA G-GC--CCGC-C-GAGC GGCC-AGCCCG-GACGG AC-

CAGC C-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220202222 22220222222022222 220

DERV028GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DERV035GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUUG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202212 22120222222022222 220

DERV031GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DERV046GUCU G-GC--CCGU-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCA-G-UUCG CCGG-UCGGGC-CUGCC UG-

2220 20120022220201222 22120222222022222 220

DERV015GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DERV036GUCU G-GC--CCGC-C-GAGC GGUC-AGCCUG-GACGG AC-

CAGU C-UGU-GGCG-G-CUCG UCGG-UCUGGC-CUGCC UG-

2220 20120022220202222 12120220212022222 220

DERV062GUCU G-GC--CCGC-C-GAGC GGUC-AGCAUG-GACGG AC-

CAGU C-UGA-GGCG-G-CUCG UCGG-UCUGGC-CUGCC CG-

2220 20120022220202222 12120220012022222 020

3j-3j'3k-3k' 3l-3l'3m-3m' 3n-3n'3o-3o'3p-3p'

DERV044GUCU A-GC--CCGC-C-GAGC GGUC-AGCCUG-GACGG AC-

CAGU C-UGA-GGCGUG-CUCG CCGG-UCUGGC-CUGCC UG-

2220 00120022220202222 22120220212022222 220

DERV016GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-CUUG CCGG-UCGAGC-CUGCC CG-

2220 20120022220202212 22120222022021222 020

DERV041GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU C-UGU-GGCG-G-UUCG CCGG-UCGGGC-CUGCC CG-

2220 20120022220201222 22120222222022222 020

DERV009GUCA G-GC--CCGC-C-GAGC GGUC-AGCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-AUCG CCGG-UCGGGC-CUGCC UG-

2222 20120022220200222 22120222222021222 220

DERV019GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCGUGACGG ACG

CAGG C-UGU-AGCGCG-UUCG CCAG-UCGGGC-CUGCC CAC

2222 20120022220201222 22220222222022222 002

DERV054GUCA G-GC--CCGC-C-GAGC GGUC--GCCCG-GGCGG AC-

CAGU C-UGU-GGCG-G-AUCG CCGG-UCGGGC-CUGCC UG-

2222 20120022220200222 22120022222021222 220

DERV068GUCC G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGC C-CGU-GGCGAGCCUCG CCGG-UCGGGC-CUGCC CG-

2220 20220022220202222 22120222222022222 020

DERV021GUCC G-GC--CCGU-C-NAGC GGUC-AGCCCG-GACGG AC-

CAGA C-CGU-GGCA-G-AUUG CNGG-UCGGGC-CUGCC CG-

2220 20220022220200212 20120222222022222 020

DERV040---- ----------------- ----------------- ---

---- ----------------- ----------------- ---

0000 00000000000000000 00000000000000000 000

DERV064GUCU G-GC--CCGC-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGU U-UGU-GGCG-G-CUCG CCGG-UCGGGC-CUGCC UG-

2220 10120022220202222 22120222222022222 220

DWTN002GUCC G-GC--UCGC-C-GAGC GGUC-AGCCCG-GUCGG ACG

CAGG C-UGU-AGCG-G-CUCG CCAG-UCGGGC-CUGCC UGU

2222 20120022220202222 22220222222020222 221

DWTN242---- ----------------- ----------------- ---

---- ----------------- ----------------- ---

0000 00000000000000000 00000000000000000 000

DWTN253GUCU G-GC--CCGC-C-GAGC GGUC-AGCCUG-GACGG AC-

CAGU C-UGU-GGCG-G-CUCG UCGG-UCUGGC-CUGCC UG-

2220 20120022220202222 12120220212022222 220

GAST248GUCC A-GC--CCGU-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGG C-UGU-GGCA-G-CUCG CCGG-UCGGGC-CUGCC CG-

2222 00120022220202222 22120222222022222 020

PSEUD21GUCC A-GC--CCGU-C-GAGC GGUC-AGCCCG-GACGG AC-

CAGG C-CGU-GGCA-G-CUCG CCAG-UCGGGC-CUGCC CG-

2222 00220022220202222 22220222222022222 020