Stems - interleave 4,
HelixBasebase pair composition %
 pair# seqscomplementarynon-complementary
   gccguaauguugaaacagcacccugaggucuu--
H6711109 98.1               1.9 
 2109 98.1               1.9 
 310998.1                1.9 
 4109 98.1               1.9 
 5109 96.3 1.9              1.9 
 610950.0 37.0 1.9 9.3             1.9 
 710963.0   17.6 16.7        0.9    1.9 
 810997.2   0.9             1.9 
 9109 38.0 60.2              1.9 
H6871109 98.1               1.9 
 2109  46.3   31.5         20.4  1.9 
 3109   98.1             1.9 
 410948.1 4.6 34.3 1.9 8.3   0.9         1.9 
 5109 93.5 4.6              1.9 
 6109 94.4    3.7           1.9 
 7109   98.1             1.9 
 8109     96.3    1.9       1.9 
 91090.9   0.9 96.3            1.9 
 1010938.0   24.1 32.4 3.7           1.9 
 1110973.1 20.4 1.9 2.8             1.9 
 12109 98.1               1.9 
   gccguaauguugaaacagcacccugaggucuu--
H700110998.1                1.9 
 210996.3   1.9             1.9 
 310913.9 1.9 79.6 2.8             1.9 
 4109     98.1           1.9 
 5109   0.9 94.4   1.9        0.9 1.9 
 610983.3 1.9  13.0             1.9 
 71090.9 2.8 90.7   2.8    0.9       1.9 
 810911.1 1.9 63.9 0.9 12.0 7.4          0.9 1.9 
 910942.6 13.0 0.9 18.5 23.1            1.9 
 1010955.6 8.3  32.4  0.9  0.9         1.9 
 11109    1.9        96.3    1.9 
H7361109 98.1               1.9 
 2109 95.4  2.8             1.9 
 310952.8 45.4               1.9 
 4109 91.7  2.8 1.9       0.9    0.9 1.9 
 510911.1 0.9 79.6 6.5             1.9 
 610913.0  10.2 58.3  13.0      2.8   0.9  1.9 
 71092.8 13.0 0.9 66.7        7.4   7.4  1.9 
 81090.9 30.6 66.7              1.9 
H777110951.9   39.8 6.5            1.9 
 210998.1                1.9 
 3109  0.9   97.2           1.9 
   gccguaauguugaaacagcacccugaggucuu--
H8121109 97.2               1.9 
 2109  97.2              1.9 
 3109 97.2               1.9 
 4109 92.6 4.6              1.9 
 51091.9 57.4 38.0              1.9 
 6109 97.2               1.9 
H822110972.2  20.4 5.6             1.9 
 2109 98.1               1.9 
 3109  98.1              1.9 
 4109   98.1             1.9 
 5109     98.1           1.9 
H837a1109 97.2               2.8 
 21097.4 89.8               2.8 
 3109     97.2           2.8 
 4109 88.0 8.3             0.9 2.8 
 510972.2   23.1 0.9          0.9  2.8 
 610925.9 4.6 54.6 12.0             2.8 
 710960.2 0.9  36.1             2.8 
H837b1109  44.4 0.9  8.3 38.9  4.6        2.8 
 2109 47.2 41.7 5.6 2.8            2.8 
 3109 3.7 0.9 91.7 0.9            2.8 
 41090.9 77.8 17.6              2.8 
 5109 54.6 38.9 0.9     0.9  0.9     0.9 2.8 
 610912.0 17.6 30.6 35.2 0.9   0.9         2.8 
 71090.9 29.6 55.6 9.3  0.9          0.9 2.8 
 81092.8 40.7 38.9 10.2  4.6           2.8 
 910992.6   2.8  1.9           2.8 
 1010996.3  0.9              2.8 
 11109  0.9          96.3    2.8 
 1210994.4   0.9   1.9          2.8 
 13109   97.2             2.8 
 1410997.2                2.8 
 15109  97.2              2.8 
 1610997.2                2.8 
 171092.8  1.9   92.6           2.8 
 18109  63.0 33.3            0.9 2.8 
 1910910.2 48.1 11.1 25.0 2.8            2.8 
 2010997.2                2.8 
 2110991.7   3.7    1.9         2.8 
   gccguaauguugaaacagcacccugaggucuu--
H837c110990.7   0.9 3.7           1.9 2.8 
 210994.4 2.8               2.8 
 3109    96.3            2.8 
 41096.5   1.9 88.0            3.7 
 510983.3  7.4  2.8 1.9           3.7 
 61093.7 27.8 63.0 0.9  0.9           3.7 
 7109 90.7 1.9   2.8    0.9       3.7