model: gamm_23Sdatafile: data/gamm/Gamma_23S_rep.nex
stem index file: data/gamm/Gamma_23S_rRNAslavemask.txt
generated with jrna version: 0.831
Totals total taxa: 108
total interleaves: 16
total blocks: 473
total bracketed blocks: 29
total unbracketed blocks: 444
total bracketed chars: 731
total unbracketed chars: 2805
total chars: 3536
longest bracketed block: 149
total blocks defined as helicies: 252
total length of defined non-helicies: 2003
total five-prime strands: 126
total three-prime strands: 126
total complete helices: 126
total complete pairs in blocks defined as helices: 817
Taxa
0 - 269796
1 - 266834
2 - 314345
3 - 387662
4 - 243365
5 - 267608
6 - 187272
7 - 394104
8 - 349124
9 - 314278
10 - 323261
11 - 243233
12 - 391008
13 - 190486
14 - 190485
15 - 160492
16 - 422289
17 - 413404
18 - 412965
19 - 177416
20 - 317025
21 - 227377
22 - 272624
23 - 59196
24 - 246195
25 - 393595
26 - 400667
27 - 62977
28 - 335284
29 - 349106
30 - 314285
31 - 247639
32 - 247633
33 - 247635
34 - 203122
35 - 349521
36 - 351348
37 - 270374
38 - 314277
39 - 400668
40 - 207949
41 - 207954
42 - 290398
43 - 314283
44 - 208964
45 - 384676
46 - 220664
47 - 205922
48 - 399739
49 - 160488
50 - 379731
51 - 223283
52 - 314276
53 - 283942
54 - 156578
55 - 314275
56 - 167879
57 - 58051
58 - 342610
59 - 326442
60 - 87626
61 - 326297
62 - 325240
63 - 318161
64 - 318167
65 - 323850
66 - 211586
67 - 398579
68 - 319224
69 - 392500
70 - 357804
71 - 314282
72 - 380703
73 - 298386
74 - 314288
75 - 314292
76 - 243277
77 - 312309
78 - 223926
79 - 391591
80 - 196600
81 - 391574
82 - 416269
83 - 339671
84 - 233412
85 - 71421
86 - 205914
87 - 221988
88 - 272843
89 - 399742
90 - 218491
91 - 83333
92 - 243265
93 - 220341
94 - 399741
95 - 214092
96 - 374463
97 - 107806
98 - 224915
99 - 372461
100 - 198804
101 - 203907
102 - 291272
103 - 343509
104 - 36870
105 - 243159
106 - 99287
107 - 187410
Interleaves
[0] Block_1 H1 : |bc|mx|cc|st|bpf|Blocks: (0..44)
[1] Block_2 H46' : |bc|mx|cc|st|bpf|Blocks: (45..77)
[2] Block_3 : |bc|mx|cc|st|bpf|Blocks: (78..108)
[3] Block_4 H533 : |bc|mx|cc|st|bpf|Blocks: (109..131)
[4] Block_5 H589' : |bc|mx|cc|st|bpf|Blocks: (132..165)
[5] Block_6 H837c' : |bc|mx|cc|st|bpf|Blocks: (166..197)
[6] Block_7 : |bc|mx|cc|st|bpf|Blocks: (198..208)
[7] Block_8 : |bc|mx|cc|st|bpf|Blocks: (209..239)
[8] Block_9 : |bc|mx|cc|st|bpf|Blocks: (240..255)
[9] Block_10 H1345' H: |bc|mx|cc|st|bpf|Blocks: (256..297)
[10] Block_11 H1792: |bc|mx|cc|st|bpf|Blocks: (298..314)
[11] Block_12 : |bc|mx|cc|st|bpf|Blocks: (315..352)
[12] Block_13 H209: |bc|mx|cc|st|bpf|Blocks: (353..392)
[13] Block_14 H2284' H: |bc|mx|cc|st|bpf|Blocks: (393..429)
[14] Block_15 H2588' : |bc|mx|cc|st|bpf|Blocks: (430..458)
[15] Block_16 H2808 : |bc|mx|cc|st|bpf|Blocks: (459..472)