28S-D2_helix-3-1
   193UUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   C--------------------------------------- 
   U--------------------------------------- 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCC 
   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAUGG - 30 - ?
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU 
200  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   AAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGG 
   203AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 
   204CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU - 31 - 3
   UUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   209CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   210AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG - 32 - ?
   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 
   212CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   213CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG - 33 - 3a
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCCCCC 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCCC 
   218AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   219AAAAAAUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
220  AUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- - 34 - 3b
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCC 
   222AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   223UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCC 
   G--------------------------------------- 
   UUUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC - 35 - 3c
   AUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   AAUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   AUUUUUUUUUUUUUUUUUUUUUUUUUUUUCCCCCCCCCCC 
   229UUUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   230AUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUGC - 36 - ?
   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 
   232AAAAAUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   233UGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG - 37 - 3d
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   235AUUUUUUGGGGGCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   236AGC------------------------------------- - 38 - ?
   237UC-------------------------------------- 
   238AAAUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AUUUUUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
240  AAAAUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCC - 39 - 3e
   U--------------------------------------- 
   AAAAAAAAUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   AC-------------------------------------- 
   244AAAAUUUUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
     
     
     
     
     
     - 40 - ?
     
     
     
     
     
     
   245CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   ---------------------------------------- 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUC 
   AAAUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   C--------------------------------------- - 41 - 3f-1
250  AUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUGCCCC 
   U--------------------------------------- 
   AAAAUUUUUUUUGGGGCCCCCCCCCCCCCCCCCCCCCCC- 
   AAAAAAUUUUUUUGGGGGGGGGGGGGGGCCCCCCCCCCCC 
   AAUUUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC- 
   255AUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCCCCCC 
     
     
     
     
     
     
     
     - 42 - ?
     
     
     
     
     
     
     
     
     
     
     - 43 - ?
     
     
     
     
     
     
     
     
     
     
     
     - 44 - ?
     
     
     
     
     
     
     
     
     
   256AAUUUGGGGGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   A--------------------------------------- 
   AAAAAUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   AAAUUUUUUGGGGGGGGGGGGGGGGGGGCCCCCCCCCCC- 
260  UC-------------------------------------- 
   ---------------------------------------- - 45 - 3f-1'
   AAUUUUUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   C--------------------------------------- 
   AAAAAUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGCC- 
   AAUUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC 
   267AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
     
     
     - 46 - ?
     
     
     
   268AAAAUUUUUUGCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   U--------------------------------------- 
270  U--------------------------------------- 
   AUUUUUUUUUUGGGCCCCCCCCCCCCCCCCCCCCCCCCCC - 47 - 3e'
   U--------------------------------------- 
   AUUUUUUUUUGGCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
   UG-------------------------------------- 
   276AAUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC 
     
     
     
     
     
     
     
     - 48 - ?
     
     
     
     
     
     
     
     
   277AAAAAAUUUUGGGGGGGGGGGGGGGGGGGGGGGGGGGCCC - 49 - 3d'
   UUUUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   279AUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
     
     - 50 - ?
     
     
   280AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   AAAAAAAAAAAAAAAAAUUGGGGGGGGGGGGGGGGGGGGG 
   U--------------------------------------- - 51 - 3c'
   UUUUUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AAAAUGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   286AAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   287GCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUC - 52 - 3b'
   GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
290  AUCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   291AUUUUUUUUUUUUUUUUUUUUUCCCCCCCCCCCCCCCCCC 
   292U--------------------------------------- - 53 - ?
   293UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   AAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC - 54 - 3a'
   UCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 
   AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 
   298GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG