18S_Domain_3_V6
Stems - interleave 19, 18S_Domain_3_V6
HelixBasebase pair composition %
 pair# seqscomplementarynon-complementary
   gccguaauguugaaacagcacccugaggucuu--
H9211176  88.6              3.4 
 217688.6                3.4 
 3176   87.4    0.6         3.4 
 4176 88.6         0.6      3.4 
 5176    88.6         0.6   3.4 
 6176   89.1             3.4 
 7176   89.1             3.4 
 817688.0   0.6           0.6  3.4 
 917688.6          0.6      3.4 
 1017685.1   0.6 2.9            3.4 
 11176 88.0    0.6   0.6        3.4 
 12176   88.6             3.4 
 13176   89.1 0.6            3.4 
 14176 89.7               3.4 
H939117689.1    0.6            3.4 
 217688.6             0.6   3.4 
 3176 0.6 0.6 86.3    2.3         3.4 
 4176    89.1            3.4 
 5176  89.1              3.4 
H944117689.1                3.4 
 2176  0.6          88.0 0.6   3.4 
 31760.6   86.3 0.6  0.6 0.6 0.6        3.4 
 417686.3  0.6  0.6      0.6      3.4 
 5176 88.0               3.4 
 61761.1          80.0 0.6    6.3 3.4 
 7176     87.4           3.4 
 817688.0                3.4 
 9176 89.1               3.4 
 1017689.1                3.4 
 1117687.4                3.4 
 12176 89.1               3.4 
   gccguaauguugaaacagcacccugaggucuu--
H9601176 0.6    96.0           3.4 
 2176     96.6           3.4 
 3176 2.3    92.0          1.1 3.4 
 417696.6                3.4 
H9841176 89.1               3.4 
 2176 89.1               3.4 
 3176 8.6  79.4        1.1     3.4 
 417688.0    0.6        0.6    3.4 
 517622.9    66.3            3.4 
 6176 0.6         1.1 79.4    8.0 3.4 
 7176 89.1               3.4 
H9961176 96.6               3.4 
 2176  0.6 93.1     0.6   2.3     3.4 
 3176 84.0 10.3   2.3           3.4 
 4176 60.0 30.3 2.3  3.4    0.6       3.4 
 517691.4   1.1 0.6   1.7       0.6 0.6 3.4 
 6176  2.3 93.7            0.6 3.4 
 7176  93.7    2.3   0.6       3.4 
 8176  1.1   93.1 0.6  1.7        3.4 
 917696.0   0.6             3.4 
 10176   96.6             3.4 
 11176          1.1 95.4     3.4 
 12176   94.9 1.1           0.6 3.4 
 1317696.6                3.4 
 141762.9   93.1    0.6         3.4 
   gccguaauguugaaacagcacccugaggucuu--
H10471176   2.3 86.9            3.4 
 217689.1                3.4 
 317689.1                3.4 
 417689.1                3.4 
 5176     88.6   0.6        3.4 
 6176    89.1            3.4 
 7176  89.1              3.4 
 8176    88.6        0.6    3.4 
 9176    87.4           0.6 3.4 
 10176 89.1               3.4 
 11176 89.1               3.4 
 1217689.1                3.4 
 13176 0.6 87.4    0.6          3.4 
 14176  88.6       0.6       3.4 
 15176 2.3 0.6         86.3     3.4 
H1068117695.4                3.4 
 2176  92.0   3.4           3.4 
 3176  93.1   2.3           3.4 
 4176 6.3            89.1   3.4 
 517695.4                3.4 
 6176  95.4              3.4 
   gccguaauguugaaacagcacccugaggucuu--
H10741176   0.6 95.4            3.4 
 21767.4   0.6 88.0            3.4 
 3176   95.4 0.6            3.4 
H10861176 4.6        89.1  1.7     4.0 
 2176     94.3   1.1        4.0 
 317693.7    1.7            4.0 
 417695.4                4.0 
H11131176 88.0        0.6       4.6 
 2176 2.9 85.1   0.6           4.6 
 3176 88.6               4.6 
 4176 5.1 4.0 2.3  4.0          73.1 10.3 
 51764.0   46.3 21.1  2.9 4.0 1.7   0.6 5.1 1.1  1.7 10.3